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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1466354_1466551_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1466354 - 1466551

Intron Length:
198

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGAGGCCG

5'SS Class:
strong_major

3'SS Sequence:
TCTTTTTGTAAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CACTGAC

U12 Branch Point Sequence:
CTTTTTGTAAAG

Flanking Amino Acid:
TGARLHSLEQDDQEDITAFA

Intron Amino Acid Position:
62

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.3
0.76
0.9
63.1
43

Major BPS
61.3
0.28
1
52.7
34.2

Major PPT
75.4
0.57
1.1
77.9
34.4

Minor 5ss
25.6
-2.8
3
30.2
43

Minor BPS
48.3
-0.2
2.1
59.29
43.1

Associated Gene:

Gene:
TBL3

Ensembl Gene ID:

Chromosome:
15

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1456621 - 1467691
11071