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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1470905_1471381_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1470905 - 1471381

Intron Length:

477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

TTTACAAAAATT

Flanking Amino Acid:

ETVFTKSPYQEFTDHLAKTH

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.8

33.7

Major BPS

73.5

0.59

81.3

29.9

Major PPT

95.3

1.02

0.5

91.7

19.4

Minor 5ss

32.8

-2

2.9

40.7

45.1

Minor BPS

47.4

-0.1

2.2

75.07

41.5

Associated Gene:

Gene:

RPS2

Ensembl Gene ID:

ENSAPLG00000008455

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026201

1468403 - 1471516

3114

ENSAPLT00000008826

1468403 - 1471516

3114