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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1479815_1480162_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1479815 - 1480162

Intron Length:

348

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGCG

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCCTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAA

U12 Branch Point Sequence:

TGCGCTGTGACT

Flanking Amino Acid:

TKKRVLTLRKSLLVHTSRRA

Intron Amino Acid Position:

350

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

68.6

36.5

Major BPS

62.9

0.32

1.2

65.3

38.6

Major PPT

85.5

0.8

0.7

77.2

31.5

Minor 5ss

25.3

-2.8

3.1

30.1

43.1

Minor BPS

47.8

-0

2.1

44.4

Associated Gene:

Gene:

RPL3L

Ensembl Gene ID:

ENSAPLG00000008390

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048061

1474877 - 1481826

6950

ENSAPLT00000008733

1474176 - 1481826

7651