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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1480283_1481769_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1480283 - 1481769

Intron Length:

1487

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TGCTCTCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAC

U12 Branch Point Sequence:

AACACCAAGACC

Flanking Amino Acid:

QTAQEKRAFMGPQKKHLVKG

Intron Amino Acid Position:

390

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

76.2

28.3

Major BPS

64.5

0.36

65.2

28.2

Major PPT

78.3

0.64

0.8

73.4

31.6

Minor 5ss

35.2

-1.7

2.8

40.3

40.2

Minor BPS

43.7

-0.5

1.9

50.72

39.8

Associated Gene:

Gene:

RPL3L

Ensembl Gene ID:

ENSAPLG00000008390

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048061

1474877 - 1481826

6950

ENSAPLT00000008733

1474176 - 1481826

7651