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Intron Name: Anas_platyrhynchos_platyrhynchos_15_15375952_15377236_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15375952 - 15377236

Intron Length:

1285

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCATTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCTTCTCATTT

Flanking Amino Acid:

KQESFVLSTAGTDQVKGVLT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

66.6

39.6

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

84.2

0.77

0.8

81.5

28.8

Minor 5ss

27.1

-2.6

26.2

36.9

Minor BPS

55.5

0.25

1.8

75.31

42.2

Associated Gene:

Gene:

ROGDI

Ensembl Gene ID:

ENSAPLG00000013380

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013945

15365750 - 15377532

11783