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Intron Name: Anas_platyrhynchos_platyrhynchos_15_15388815_15390615_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15388815 - 15390615

Intron Length:

1801

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGATCT

5'SS Class:

strong_major

3'SS Sequence:

GTCTTCCCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

TCTTCATTAATG

Flanking Amino Acid:

VNGSITPTDKKIGFLGLGLM

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.9

30.6

Major BPS

0.72

78.4

31.2

Major PPT

76.5

0.6

0.8

73.7

31.4

Minor 5ss

42.3

-0.9

3.1

58.2

40.1

Minor BPS

69.5

0.47

1.7

72.41

40.7

Associated Gene:

Gene:

GLYR1

Ensembl Gene ID:

ENSAPLG00000013726

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047552

15385110 - 15397344

12235

ENSAPLT00000046682

15385110 - 15397344

12235

ENSAPLT00000014335

15385158 - 15399718

14561