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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_15453491_15548319_R

Intron Information:

Intron Rank:
29
Intron Class:
major-like
Intron Phase:
0
Intron Coordinates:
15453491 - 15548319
Intron Length:
94829

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTAATTGCA
5'SS Class:
strong_major
3'SS Sequence:
GTGTATACAAAAG|T
3'SS Class:
degenerate_major
U2 Branch Point Sequence:
TTTATAT
U12 Branch Point Sequence:
CAACTCTAAAGT
Flanking Amino Acid:
LDIQEKEFEKFKFSC*
Intron Amino Acid Position:
1033

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
85.3
0.83
0.9
77
31.5
Major BPS
79.2
0.73
1
75.3
39.4
Major PPT
50.9
0.02
1.2
50.7
41.7
Minor 5ss
33
-1.9
3.1
42.1
44.5
Minor BPS
45.9
-0.2
1.9
58.69
44.3

Associated Gene:

Gene:
USP7
Ensembl Gene ID:
ENSAPLG00000015128
Chromosome:
15

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000015845
15453473 - 15604603
151131