Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_15550745_15551255_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15550745 - 15551255

Intron Length:

511

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGCTG

5'SS Class:

major

3'SS Sequence:

TTGTGTTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CCCCTTTTAATG

Flanking Amino Acid:

ELSEKGSGKLRLLEIVSYKI

Intron Amino Acid Position:

935

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

66.7

44.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.1

0.56

1.1

79.2

38.4

Minor 5ss

33.7

-1.9

3.5

46.7

48.6

Minor BPS

50.3

-0.1

1.4

46.97

41.4

Associated Gene:

Gene:

USP7

Ensembl Gene ID:

ENSAPLG00000015128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026813

15544103 - 15594676

50574

ENSAPLT00000015848

15541441 - 15578298

36858

ENSAPLT00000015845

15453473 - 15604603

151131

ENSAPLT00000046741

15543966 - 15604603

60638

ENSAPLT00000037277

15544414 - 15578298

33885