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Intron Name: Anas_platyrhynchos_platyrhynchos_15_15554100_15555484_R


Intron Information:

Intron Rank:
21

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
15554100 - 15555484

Intron Length:
1385

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAA|GTATGTATT

5'SS Class:
strong_major

3'SS Sequence:
TCTGCTCTTGTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTATCAT

U12 Branch Point Sequence:
GTATTATCATTT

Flanking Amino Acid:
LMDGDIIVFQKDDPENDNSE

Intron Amino Acid Position:
765

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.6
0.75
0.9
86.3
29

Major BPS
88.2
0.95
0.9
88.3
28.5

Major PPT
78.6
0.64
0.8
73.4
31.5

Minor 5ss
49.5
-0
2.5
68.8
35.6

Minor BPS
44.8
-0.3
1.9
62.88
41.2

Associated Gene:

Gene:
USP7

Ensembl Gene ID:

Chromosome:
15

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

15453473 - 15604603
151131

15543966 - 15604603
60638

15544414 - 15578298
33885

15544103 - 15594676
50574

15541441 - 15578298
36858