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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1567967_1568361_F


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1567967 - 1568361

Intron Length:
395

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGAGCT

5'SS Class:
strong_major

3'SS Sequence:
ATATTTTTTAAAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTCAC

U12 Branch Point Sequence:
TATTTTTTAAAG

Flanking Amino Acid:
ISKTIITTNPETAEANVLFS

Intron Amino Acid Position:
260

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
91.6
0.98
0.8
81.6
30

Major BPS
82.3
0.8
0.8
83.6
25.8

Major PPT
74.4
0.55
1.1
75.2
38.1

Minor 5ss
33.1
-1.9
3.4
48.3
47.4

Minor BPS
67.6
0.41
1.4
69.32
37.9

Associated Gene:

Gene:
MEIOB

Ensembl Gene ID:

Chromosome:
15

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1559300 - 1571259
11960