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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1570160_1570722_F


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1570160 - 1570722

Intron Length:
563

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAA|GTTGGTATT

5'SS Class:
major

3'SS Sequence:
ATTATTTTTACAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
AGGTTTTTAATT

Flanking Amino Acid:
LLERSKIYFKITLSPSWRTG

Intron Amino Acid Position:
436

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.5
0.41
1.2
76.7
38.5

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
86.3
0.82
0.8
80.5
36.4

Minor 5ss
38.3
-1.3
3.1
52.7
38.2

Minor BPS
67.7
0.63
1.2
74.16
37.3

Associated Gene:

Gene:
MEIOB

Ensembl Gene ID:

Chromosome:
15

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1559300 - 1571259
11960