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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1588875_1589653_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1588875 - 1589653

Intron Length:

779

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ACG|GCGTATGGG

5'SS Class:

weak_major

3'SS Sequence:

AAGCTGACCGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCTGAC

U12 Branch Point Sequence:

GGAAGCTGACCG

Flanking Amino Acid:

VNAVLLGGGTPCPTWCSSSI

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.7

0.11

1.3

49.4

44.2

Major BPS

57.5

0.19

1.1

48.8

38.1

Major PPT

56.5

0.15

39.4

Minor 5ss

22.2

-3.2

3.9

30.2

43.5

Minor BPS

39.4

-0.9

39.79

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021911

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024129

1588317 - 1592219

3903