Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_16148024_16151592_R

Intron Information:

Intron Rank:

154576

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

16148024 - 16151592

Intron Length:

3569

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTGATACAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTATTC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.3

31.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

55.8

0.13

1.1

55.7

37.4

Minor 5ss

28.5

-2.5

3.5

37.1

47.5

Minor BPS

67.3

0.52

1.5

77.16

33.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030728

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030786

16147851 - 16157489

9639