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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_16216596_16218478_R

Intron Information:

Intron Rank:
154575
Intron Class:
major
Intron Phase:
Intron Coordinates:
16216596 - 16218478
Intron Length:
1883

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTTGGTGAC
5'SS Class:
major
3'SS Sequence:
CATTGTTTTCTAG|T
3'SS Class:
major_PPT
U2 Branch Point Sequence:
CTGTTAT
U12 Branch Point Sequence:
TTTTTCTCCATT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
73.6
0.56
1.2
67.9
37.7
Major BPS
69
0.47
1.2
61.1
45.5
Major PPT
77.6
0.62
0.9
69.5
41.3
Minor 5ss
27.9
-2.5
3.2
34.6
41.8
Minor BPS
59.2
0.37
2
83.48
38.1

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000030728
Chromosome:
15

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000023240
16151534 - 16218788
67255