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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1623825_1625173_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1623825 - 1625173

Intron Length:

1349

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCAGG

5'SS Class:

major

3'SS Sequence:

ATTTCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

CATTGCTCATCT

Flanking Amino Acid:

GLDDYIAPSQECVKPVKVEK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.1

59.7

46.7

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

88.1

0.86

0.7

85.6

28.2

Minor 5ss

31.9

-2.1

3.1

39.2

46.3

Minor BPS

47.6

-0.1

2.2

69.27

47.2

Associated Gene:

Gene:

CIAO3

Ensembl Gene ID:

ENSAPLG00000012541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013100

1623645 - 1635824

12180