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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1626764_1627098_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1626764 - 1627098

Intron Length:

335

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTGTTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAA

U12 Branch Point Sequence:

ACTGTCTGAACA

Flanking Amino Acid:

ELCKVLTSNKTAAPNEQKLV

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.8

34.3

Major BPS

64.4

0.36

1.2

57.3

41.7

Major PPT

74.6

0.55

1.1

79.2

38.4

Minor 5ss

31.6

-2.1

3.4

42.4

45.1

Minor BPS

58.5

0.26

1.6

65.94

40.6

Associated Gene:

Gene:

CIAO3

Ensembl Gene ID:

ENSAPLG00000012541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032876

1624521 - 1635824

11304

ENSAPLT00000013100

1623645 - 1635824

12180