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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1627732_1628080_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1627732 - 1628080

Intron Length:

349

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGTAG

5'SS Class:

strong_major

3'SS Sequence:

AGACTCTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGTTTGCTAATT

Flanking Amino Acid:

ALPMLASACPGWICYAEKTH

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

68.3

39.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

66.7

0.38

0.9

62.6

38.8

Minor 5ss

42.2

-0.9

3.1

54.5

49.7

Minor BPS

49.7

0.06

2.3

76.83

Associated Gene:

Gene:

CIAO3

Ensembl Gene ID:

ENSAPLG00000012541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032876

1624521 - 1635824

11304

ENSAPLT00000013100

1623645 - 1635824

12180