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Intron Name: Anas_platyrhynchos_platyrhynchos_15_16277597_16294069_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16277597 - 16294069

Intron Length:

16473

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTTCTTTTATT

Flanking Amino Acid:

VEDALVSLKTGKLDAFIYDA

Intron Amino Acid Position:

583

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

82.3

32.2

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

90.4

0.91

0.7

89.1

Minor 5ss

44.3

-0.6

2.8

53.4

43.8

Minor BPS

75.6

0.89

1.5

91.64

31.3

Associated Gene:

Gene:

GRIN2A

Ensembl Gene ID:

ENSAPLG00000004053

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031628

16259639 - 16480336

220698

ENSAPLT00000004160

16259639 - 16350348

90710