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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1629379_1629589_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1629379 - 1629589

Intron Length:

211

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

GCTTCTGCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTTAT

U12 Branch Point Sequence:

TTTTCCTTTATC

Flanking Amino Acid:

TRDVDCVITTGEVLKLLEQE

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.3

1.09

0.7

87.1

Major BPS

71.5

0.54

1.1

63.3

42.8

Major PPT

72.5

0.51

0.9

69.7

36.7

Minor 5ss

35.1

-1.7

2.7

42.8

Minor BPS

78.4

0.88

1.5

86.75

30.6

Associated Gene:

Gene:

CIAO3

Ensembl Gene ID:

ENSAPLG00000012541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032876

1624521 - 1635824

11304

ENSAPLT00000013100

1623645 - 1635824

12180