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Intron Name: Anas_platyrhynchos_platyrhynchos_15_16294231_16300781_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16294231 - 16300781

Intron Length:

6551

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCTCTT

5'SS Class:

major

3'SS Sequence:

CTTTTCTCTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

AAGACTTTACTT

Flanking Amino Acid:

DQVTGLSDKKFQRPHDYSPP

Intron Amino Acid Position:

530

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.2

72.7

44.5

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

84.6

0.78

0.7

77.8

31.1

Minor 5ss

44.3

-0.6

3.3

67.2

43.9

Minor BPS

50.8

0.1

1.6

63.85

Associated Gene:

Gene:

GRIN2A

Ensembl Gene ID:

ENSAPLG00000004053

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031628

16259639 - 16480336

220698

ENSAPLT00000004160

16259639 - 16350348

90710