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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1629663_1633340_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1629663 - 1633340

Intron Length:

3678

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGAACA

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAC

U12 Branch Point Sequence:

AGCCCCTTAAAA

Flanking Amino Acid:

SDVDPAPLDTMFSSAAEEEL

Intron Amino Acid Position:

337

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

76.4

32.2

Major BPS

60.7

0.27

1.1

67.6

34.6

Major PPT

81.7

0.71

0.7

80.3

Minor 5ss

36.2

-1.6

46.6

41.5

Minor BPS

63.2

0.41

1.4

65.83

39.8

Associated Gene:

Gene:

CIAO3

Ensembl Gene ID:

ENSAPLG00000012541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032876

1624521 - 1635824

11304

ENSAPLT00000013100

1623645 - 1635824

12180