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Intron Name: Anas_platyrhynchos_platyrhynchos_15_16308311_16308434_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16308311 - 16308434

Intron Length:

124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTGGATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGTAAT

U12 Branch Point Sequence:

TCTTTGTGGATC

Flanking Amino Acid:

NNVWNGMIGEVVYHRAVMAV

Intron Amino Acid Position:

360

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.2

27.2

Major BPS

58.9

0.22

1.4

61.7

43.1

Major PPT

66.8

0.38

1.1

44.2

Minor 5ss

44.5

-0.6

2.8

38.4

Minor BPS

46.4

-0.3

2.2

61.09

39.2

Associated Gene:

Gene:

GRIN2A

Ensembl Gene ID:

ENSAPLG00000004053

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004160

16259639 - 16350348

90710

ENSAPLT00000031628

16259639 - 16480336

220698