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Intron Name: Anas_platyrhynchos_platyrhynchos_15_16310273_16323028_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16310273 - 16323028

Intron Length:

12756

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCATC

5'SS Class:

strong_major

3'SS Sequence:

CTTGGCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCAGAT

U12 Branch Point Sequence:

GCTTCTGTATCT

Flanking Amino Acid:

VLNKDREWEKVGKWENNSLS

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.8

81.3

32.8

Major BPS

65.3

0.38

60.7

37.6

Major PPT

80.6

0.69

0.9

76.7

37.4

Minor 5ss

38.5

-1.3

51.2

45.7

Minor BPS

49.3

0.03

2.2

71.96

45.3

Associated Gene:

Gene:

GRIN2A

Ensembl Gene ID:

ENSAPLG00000004053

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031628

16259639 - 16480336

220698

ENSAPLT00000004160

16259639 - 16350348

90710