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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1633479_1634544_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1633479 - 1634544

Intron Length:

1066

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGAAGT

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTTCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTAATTTTGATA

Flanking Amino Acid:

QVDTIQYKPLKNKDFQEVTL

Intron Amino Acid Position:

383

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

78.3

36.2

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

82.3

0.73

0.8

80.6

31.5

Minor 5ss

36.9

-1.5

3.1

49.9

40.3

Minor BPS

59.3

0.29

1.2

66.61

33.6

Associated Gene:

Gene:

CIAO3

Ensembl Gene ID:

ENSAPLG00000012541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032876

1624521 - 1635824

11304

ENSAPLT00000013100

1623645 - 1635824

12180