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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1634703_1635351_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1634703 - 1635351

Intron Length:

649

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTATGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TTTGTTTTATGC

Flanking Amino Acid:

HYVEVMACPSGCLNGGGQIE

Intron Amino Acid Position:

436

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

84.8

0.78

0.9

81.4

35.3

Minor 5ss

34.4

-1.8

3.4

46.7

48.6

Minor BPS

48.9

-0.1

1.9

64.74

41.8

Associated Gene:

Gene:

CIAO3

Ensembl Gene ID:

ENSAPLG00000012541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032876

1624521 - 1635824

11304

ENSAPLT00000013100

1623645 - 1635824

12180