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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1644093_1644638_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1644093 - 1644638

Intron Length:

546

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGAGG

5'SS Class:

major

3'SS Sequence:

TCCCTCCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

AGCCTTTGCATT

Flanking Amino Acid:

EFTYNPFMRVREKTVQQHAG

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

64.3

47.1

Major BPS

0.62

1.4

85.7

34.9

Major PPT

72.3

0.5

0.9

68.6

31.7

Minor 5ss

30.3

-2.3

3.3

39.2

46.3

Minor BPS

41.7

-0.5

1.7

52.46

36.7

Associated Gene:

Gene:

HAGH

Ensembl Gene ID:

ENSAPLG00000008216

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008564

1643993 - 1650746

6754