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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1646283_1647345_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1646283 - 1647345

Intron Length:

1063

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGGA

5'SS Class:

major

3'SS Sequence:

GCCTTCTTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTTAA

U12 Branch Point Sequence:

AGTAGCTTAAGC

Flanking Amino Acid:

QKVSHLTTLKVGSLNVKCLC

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

66.4

39.3

Major BPS

58.3

0.21

1.1

49.4

37.6

Major PPT

78.4

0.64

0.8

32.6

Minor 5ss

27.9

-2.5

3.5

46.8

Minor BPS

49.4

-0

2.1

62.33

42.8

Associated Gene:

Gene:

HAGH

Ensembl Gene ID:

ENSAPLG00000008216

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032421

1644805 - 1649634

4830

ENSAPLT00000008564

1643993 - 1650746

6754