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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1649066_1649529_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1649066 - 1649529

Intron Length:

464

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGCTG

5'SS Class:

major

3'SS Sequence:

CCTGTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TGAGTTCTAATG

Flanking Amino Acid:

AIVDPVQPQKVLDAVKKHGV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

66.2

44.9

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

81.9

0.72

0.8

76.4

32.3

Minor 5ss

34.4

-1.8

3.4

47.3

48.1

Minor BPS

45.9

-0.4

1.7

48.73

39.4

Associated Gene:

Gene:

HAGH

Ensembl Gene ID:

ENSAPLG00000008216

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032421

1644805 - 1649634

4830