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Intron Name: Anas_platyrhynchos_platyrhynchos_15_16502560_16503720_F

Intron Information:

Intron Rank:

147158

Intron Class:

major

Intron Phase:

Intron Coordinates:

16502560 - 16503720

Intron Length:

1161

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGCAAC

5'SS Class:

major

3'SS Sequence:

TTTTTCTCCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGTTGAT

U12 Branch Point Sequence:

TTTTTTTTTTCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

68.4

38.7

Major BPS

63.5

0.33

1.4

57.1

49.4

Major PPT

89.7

0.89

0.6

89.1

19.9

Minor 5ss

32.8

-2

3.1

41.6

45.4

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029272

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036309

16502224 - 16506785

4562