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Intron Name: Anas_platyrhynchos_platyrhynchos_15_16503855_16505269_F

Intron Information:

Intron Rank:

147156

Intron Class:

major

Intron Phase:

Intron Coordinates:

16503855 - 16505269

Intron Length:

1415

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TTTGAAGTAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

75.1

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

84.9

0.78

0.8

80.1

31.9

Minor 5ss

40.6

-1

2.8

53.5

43.5

Minor BPS

44.9

-0.3

2.4

65.2

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029272

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036309

16502224 - 16506785

4562

ENSAPLT00000028018

16503162 - 16506785

3624