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Intron Name: Anas_platyrhynchos_platyrhynchos_15_16518769_16519323_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16518769 - 16519323

Intron Length:

555

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTCCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

GGTTACTAAATC

Flanking Amino Acid:

VLTSIIQLLSCLCVMIAASI

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

79.5

28.4

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

79.1

0.66

0.8

71.3

35.2

Minor 5ss

31.3

-2.1

3.3

44.6

43.6

Minor BPS

53.8

0.1

1.9

65.01

40.4

Associated Gene:

Gene:

EMP2

Ensembl Gene ID:

ENSAPLG00000003965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004065

16518236 - 16523351

5116