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Intron Name: Anas_platyrhynchos_platyrhynchos_15_16644215_16644399_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16644215 - 16644399

Intron Length:

185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGGG

5'SS Class:

major

3'SS Sequence:

CTTTGTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCCAG

U12 Branch Point Sequence:

TCGTTCCCAGGG

Flanking Amino Acid:

HGLAADESKQVALLDIDICG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

63.1

43.4

Major BPS

49.3

-0

1.7

66.4

42.2

Major PPT

88.1

0.86

0.8

80.3

37.3

Minor 5ss

25.2

-2.8

3.2

43.1

Minor BPS

36.7

-1.1

2.1

39.37

44.3

Associated Gene:

Gene:

NUBP1

Ensembl Gene ID:

ENSAPLG00000003389

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003498

16641340 - 16648564

7225