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Intron Name: Anas_platyrhynchos_platyrhynchos_15_16647925_16648511_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16647925 - 16648511

Intron Length:

587

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTCTG

5'SS Class:

major

3'SS Sequence:

CTTGTCTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTTAT

U12 Branch Point Sequence:

TTATCTGTATTA

Flanking Amino Acid:

ATASYRNIIQRIQEYCDLQH

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

66.4

45.1

Major BPS

63.6

0.34

1.4

57.4

49.1

Major PPT

82.1

0.72

0.8

73.5

37.1

Minor 5ss

39.1

-1.2

46.9

42.4

Minor BPS

49.1

-0

2.2

67.51

39.7

Associated Gene:

Gene:

NUBP1

Ensembl Gene ID:

ENSAPLG00000003389

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003498

16641340 - 16648564

7225