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Intron Name: Anas_platyrhynchos_platyrhynchos_15_16656201_16658629_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16656201 - 16658629

Intron Length:

2429

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGACG

5'SS Class:

major

3'SS Sequence:

GTTGTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCTAA

U12 Branch Point Sequence:

TGTCCCATAACT

Flanking Amino Acid:

EELALRKAQIRHPLATFFHL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.2

44.2

Major BPS

59.6

0.24

1.3

58.7

39.9

Major PPT

85.2

0.79

0.9

76.9

42.1

Minor 5ss

38.1

-1.3

3.1

49.5

46.5

Minor BPS

71.7

0.76

1.6

36.2

Associated Gene:

Gene:

TVP23A

Ensembl Gene ID:

ENSAPLG00000003074

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003134

16649163 - 16658784

9622