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Intron Name: Anas_platyrhynchos_platyrhynchos_15_16683523_16684857_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16683523 - 16684857

Intron Length:

1335

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTCACCTTTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TTTGCAATATTT

Flanking Amino Acid:

QQEKQVEDSFAGSLILDEMT

Intron Amino Acid Position:

106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

83.3

29.1

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

79.3

0.66

0.8

77.3

31.3

Minor 5ss

-0.6

3.2

62.3

43.4

Minor BPS

-0.1

2.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028876

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041539

16680409 - 16703932

23524