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Intron Name: Anas_platyrhynchos_platyrhynchos_15_16761618_16764362_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16761618 - 16764362

Intron Length:

2745

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTAAG

5'SS Class:

major

3'SS Sequence:

TTAATTTCTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

PCGDVERTRRAIRVFFMLRS

Intron Amino Acid Position:

649

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

71.6

40.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

70.3

0.46

1.1

68.5

42.1

Minor 5ss

36.3

-1.5

2.7

40.2

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

CLEC16A

Ensembl Gene ID:

ENSAPLG00000002585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023426

16723311 - 16802554

79244

ENSAPLT00000017712

16723311 - 16802554

79244

ENSAPLT00000002611

16730536 - 16802292

71757

ENSAPLT00000045282

16723311 - 16802554

79244

ENSAPLT00000038623

16723311 - 16802554

79244