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Intron Name: Anas_platyrhynchos_platyrhynchos_15_16775506_16776301_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

16775506 - 16776301

Intron Length:

796

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACAGT

5'SS Class:

strong_major

3'SS Sequence:

TAATTAAACATAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTATAATTAAAC

Flanking Amino Acid:

ARRMKMQRIAALLDLPVQPS

Intron Amino Acid Position:

808

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

75.1

41.1

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

58.5

0.19

52.6

40.4

Minor 5ss

40.5

-1.1

3.1

57.9

46.4

Minor BPS

56.4

0.18

1.9

71.52

38.5

Associated Gene:

Gene:

CLEC16A

Ensembl Gene ID:

ENSAPLG00000002585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023426

16723311 - 16802554

79244

ENSAPLT00000017712

16723311 - 16802554

79244

ENSAPLT00000002611

16730536 - 16802292

71757

ENSAPLT00000045282

16723311 - 16802554

79244

ENSAPLT00000038623

16723311 - 16802554

79244