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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_16839446_16839729_F

Intron Information:

Intron Rank:
151325
Intron Class:
major
Intron Phase:
Intron Coordinates:
16839446 - 16839729
Intron Length:
284

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAA|GTAATTGTG
5'SS Class:
major
3'SS Sequence:
GTATTTTCTCAAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
ATTTTAT
U12 Branch Point Sequence:
ATTTTATGATCA
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
75.5
0.6
1
71.8
38.2
Major BPS
87.7
0.94
0.8
77.7
36.7
Major PPT
70.4
0.46
1.1
68.4
42.3
Minor 5ss
38.1
-1.3
3.3
49.6
41
Minor BPS
49
-0
1.9
67.76
38.2

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000031232
Chromosome:
15

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000041673
16838483 - 16839797
1315