Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_16844119_16847604_F

Intron Information:

Intron Rank:

135800

Intron Class:

major

Intron Phase:

Intron Coordinates:

16844119 - 16847604

Intron Length:

3486

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTGTG

5'SS Class:

major

3'SS Sequence:

CTCTCTCTCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TATGCTTTCATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

70.3

40.5

Major BPS

87.6

0.93

0.9

89.3

Major PPT

68.6

0.42

33.1

Minor 5ss

38.5

-1.3

3.3

54.8

43.4

Minor BPS

50.5

-0.1

1.9

59.68

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023123

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046586

16843544 - 16847658

4115