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Intron Name: Anas_platyrhynchos_platyrhynchos_15_16953563_16956993_R

Intron Information:

Intron Rank:

136630

Intron Class:

major

Intron Phase:

Intron Coordinates:

16953563 - 16956993

Intron Length:

3431

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCTCTT

5'SS Class:

major

3'SS Sequence:

TTTACTTCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCATTTTACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.2

72.7

44.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

86.2

0.81

0.7

80.5

31.4

Minor 5ss

44.3

-0.6

3.3

67.2

43.9

Minor BPS

54.5

0.22

1.6

71.2

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029712

16951123 - 16959358

8236