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Intron Name: Anas_platyrhynchos_platyrhynchos_15_16959359_16960177_R

Intron Information:

Intron Rank:

136634

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

16959359 - 16960177

Intron Length:

819

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

GATATGCCAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

ATGCTCTGAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

38.6

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

59.4

0.21

1.1

51.7

42.4

Minor 5ss

38.7

-1.3

2.8

49.1

46.7

Minor BPS

52.7

-0

1.5

55.77

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037811

16957012 - 16961637

4626