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Intron Name: Anas_platyrhynchos_platyrhynchos_15_16960340_16961414_R

Intron Information:

Intron Rank:

136635

Intron Class:

major

Intron Phase:

Intron Coordinates:

16960340 - 16961414

Intron Length:

1075

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGTGCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

CTTCCCATGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

23.7

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

73.1

0.52

0.9

72.8

37.5

Minor 5ss

32.8

-2

2.9

39.7

45.8

Minor BPS

0.4

1.6

77.69

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037811

16957012 - 16961637

4626