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Intron Name: Anas_platyrhynchos_platyrhynchos_15_16961638_16962263_R

Intron Information:

Intron Rank:

136623

Intron Class:

major

Intron Phase:

Intron Coordinates:

16961638 - 16962263

Intron Length:

626

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAAGA

5'SS Class:

strong_major

3'SS Sequence:

TTCCTGTCAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TTCCTGTCAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

73.4

37.3

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

69.6

0.44

0.9

65.9

34.7

Minor 5ss

38.9

-1.2

2.8

49.3

46.5

Minor BPS

-0.3

2.2

60.18

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023422

16961462 - 16966795

5334