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Intron Name: Anas_platyrhynchos_platyrhynchos_15_17024535_17026392_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17024535 - 17026392

Intron Length:

1858

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTTGGTTCT

5'SS Class:

major

3'SS Sequence:

ATTTTTTTGTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TTTCCCTCAATT

Flanking Amino Acid:

DHFCPNCNTHFIIRVRQEEA

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.1

0.31

1.3

66.5

39.6

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

84.1

0.77

0.9

85.1

34.9

Minor 5ss

40.2

-1.1

3.1

56.2

41.2

Minor BPS

74.9

0.86

1.5

90.16

33.5

Associated Gene:

Gene:

LITAF

Ensembl Gene ID:

ENSAPLG00000002299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002325

17024484 - 17033562

9079