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Intron Name: Anas_platyrhynchos_platyrhynchos_15_17026478_17026796_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17026478 - 17026796

Intron Length:

319

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAGGTTAA

5'SS Class:

major

3'SS Sequence:

TTTTCCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

AGTGTTAAAACT

Flanking Amino Acid:

WLSCGGLCLLGCIAGCCLIP

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

1.1

71.1

37.5

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

0.97

0.6

88.6

20.7

Minor 5ss

37.7

-1.4

3.1

39.8

46.2

Minor BPS

-0.3

1.9

63.06

41.5

Associated Gene:

Gene:

LITAF

Ensembl Gene ID:

ENSAPLG00000002299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028876

17025486 - 17033562

8077

ENSAPLT00000025268

17026369 - 17060520

34152

ENSAPLT00000002325

17024484 - 17033562

9079

ENSAPLT00000040612

17026166 - 17033562

7397