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Intron Name: Anas_platyrhynchos_platyrhynchos_15_17029552_17033426_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

17029552 - 17033426

Intron Length:

3875

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

CATTATATTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

AAGTCCTTAGTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

79.7

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

72.1

0.5

0.9

63.2

42.3

Minor 5ss

42.9

-0.8

2.7

55.2

42.1

Minor BPS

65.6

0.57

1.6

75.73

41.1

Associated Gene:

Gene:

LITAF

Ensembl Gene ID:

ENSAPLG00000002299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040612

17026166 - 17033562

7397

ENSAPLT00000028876

17025486 - 17033562

8077

ENSAPLT00000002325

17024484 - 17033562

9079