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Intron Name: Anas_platyrhynchos_platyrhynchos_15_17029552_17060181_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

17029552 - 17060181

Intron Length:

30630

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTA|GTAAGAACT

5'SS Class:

major

3'SS Sequence:

CATTATATTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

AAGTCCTTAGTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

73.6

34.9

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

72.1

0.5

0.9

63.2

42.3

Minor 5ss

-1.4

52.8

38.7

Minor BPS

65.6

0.57

1.6

75.73

41.1

Associated Gene:

Gene:

LITAF

Ensembl Gene ID:

ENSAPLG00000002299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025268

17026369 - 17060520

34152