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Intron Name: Anas_platyrhynchos_platyrhynchos_15_17250744_17251716_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

17250744 - 17251716

Intron Length:

973

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTATGTTGC

5'SS Class:

major

3'SS Sequence:

TGTTGCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

CTTTTCTTATTG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

66.2

40.5

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

83.3

0.75

0.9

77.1

37.1

Minor 5ss

47.1

-0.3

2.5

61.5

43.4

Minor BPS

61.9

0.24

1.7

66.23

42.5

Associated Gene:

Gene:

BFAR

Ensembl Gene ID:

ENSAPLG00000013901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014483

17244460 - 17251789

7330