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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1725636_1727013_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1725636 - 1727013

Intron Length:

1378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GATCTGTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

AATTATATATTT

Flanking Amino Acid:

ALNIVTENLHMCPWAKNLCR

Intron Amino Acid Position:

427

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

87.3

Major BPS

71.4

0.53

67.3

39.3

Major PPT

73.1

0.52

0.9

69.7

41.2

Minor 5ss

41.1

-1

3.4

62.8

Minor BPS

45.9

-0.2

1.9

65.54

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011695

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012193

1725342 - 1734343

9002