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Intron Name: Anas_platyrhynchos_platyrhynchos_15_17260226_17260315_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17260226 - 17260315

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTATGTAAT

5'SS Class:

strong_major

3'SS Sequence:

ATCTTTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTCAT

U12 Branch Point Sequence:

ATCTTTTTCACA

Flanking Amino Acid:

CTFKYDHTEDKYIMKSFNFY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

0.9

82.5

29.7

Major BPS

78.3

0.7

0.8

77.7

26.1

Major PPT

84.3

0.77

0.8

79.6

31.8

Minor 5ss

45.2

-0.5

2.6

59.7

39.1

Minor BPS

57.9

0.24

1.7

68.42

38.7

Associated Gene:

Gene:

PARN

Ensembl Gene ID:

ENSAPLG00000013914

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033374

17260164 - 17321036

60873

ENSAPLT00000014581

17256748 - 17293838

37091